Added special connected pores reporter, which save connected pore pairs in file report...

Pores/Bootstrap.cs

@@ -41,6 +41,11 @@ namespace Pores
                 .RegisterType<ReportGenerator>()
                 .AsSelf();
 
+            build
+                .RegisterType<ConnectedPoreReportGenerator>()
+                .AsSelf()
+                .SingleInstance();
+
             build
                 .RegisterType<MainWindowViewModel>()
                 .AsSelf()

Pores/Controllers/BatchGenerator.cs

@@ -35,7 +35,7 @@ namespace Pores.Controllers
             };
             BatchSaver.Save(
                 pores.Where(p => IsPointInsideOfCube(p.Point, p1, p2)), 
-                BatchSaver.FileNamer(string.Format("batch_{0}", index)));
+                BatchSaver.AddOther(string.Format("batch_{0}", index)));
         }
        
         public bool IsPointInsideOfCube(Point3D p, Point3D vertex1, Point3D vertex2)

Pores/Controllers/ConnectedPoreReportGenerator.cs

@@ -0,0 +1,47 @@
+using Pores.Models;
+using System;
+using System.Collections.Generic;
+using System.Linq;
+
+namespace Pores.Controllers
+{
+    public class ConnectedPoreReportGenerator
+    {
+        public Material Material { get; }
+        public ReportGenerator ReportGenerator { get; }
+
+        public ConnectedPoreReportGenerator(Material material, ReportGenerator reportGenerator)
+        {
+            Material = material;
+            ReportGenerator = reportGenerator;
+        }
+
+        public void CreateReport(IList<Pore> pores, int index)
+        {
+            IList<Tuple<Pore,Pore>> report = new List<Tuple<Pore, Pore>>();
+            foreach(Pore p1 in pores)
+                foreach(Pore p2 in pores)
+                    if (!p1.Equals(p2))
+                        if (!report.Any(a => a.Item1.Id == p2.Id && a.Item2.Id == p1.Id))
+                            if (IsTwoPoresConnecting(p1, p2))
+                                report.Add(Tuple.Create(p1, p2));
+            ReportGenerator.Save(report, ReportGenerator.AddOther("report_connected_pores_" + index));
+        }
+
+        public double DistanceBetweenTwoPoints(Point3D point1, Point3D point2)
+        {
+            return Math.Sqrt(
+                Math.Pow(point2.X - point1.X, 2) + 
+                Math.Pow(point2.Y - point1.Y, 2) + 
+                Math.Pow(point2.Z - point1.Z, 2)
+                );
+        }
+
+        public bool IsTwoPoresConnecting(Pore pore1, Pore pore2)
+        {
+            if (DistanceBetweenTwoPoints(pore1.Point, pore2.Point) > pore1.Radius + pore2.Radius)
+                return false;
+            return true;
+        }
+    }
+}

Pores/Controllers/ReportGenerator.cs

@@ -12,7 +12,7 @@ namespace Pores.Controllers
 {
     public class ReportGenerator : BaseSaveLoadController
     {
-        public string FileNamer(string fileName)
+        public string AddOther(string fileName)
         {
             return
                 ".\\results\\" 

Pores/MainWindowViewModel.cs

@@ -4,8 +4,6 @@ using Pores.Models;
 using Pores.Helpers;
 using System.Windows.Input;
 using System.Collections.Generic;
-using System;
-using System.Threading.Tasks;
 using System.Threading;
 using System.Collections.ObjectModel;
 using System.IO;
@@ -22,6 +20,7 @@ namespace Pores
         public IPoreLocalization SelectedLocalization { get; set; }
         public IPoreGenerator PoreGeneratorInstance { get; set; }
         public BatchGenerator BatchGenerator { get; }
+        public ConnectedPoreReportGenerator ConnectedPoreReportGenerator { get; }
 
         private ReportGenerator ReportSaver;
 
@@ -47,13 +46,15 @@ namespace Pores
             IEnumerable<IPoreLocalization> localizations, 
             IPoreGenerator poreGenerator,
             ReportGenerator reportSaver,
-            BatchGenerator batchGenerator)
+            BatchGenerator batchGenerator,
+            ConnectedPoreReportGenerator connectedPoreReportGenerator)
         {
             CurrentMaterial = material;
             Localizations = localizations;
             PoreGeneratorInstance = poreGenerator;
             ReportSaver = reportSaver;
             BatchGenerator = batchGenerator;
+            ConnectedPoreReportGenerator = connectedPoreReportGenerator;
 
             GeneratePoresCommand = new RelayCommand(GeneratePoresToForm, () => SelectedLocalization != null);
             SaveToFileCommand = new RelayCommand(Save, () => Pores?.Count > 0);
@@ -90,7 +91,7 @@ namespace Pores
                 CurrentMaterial.Height,
                 pores.Count);
 
-            ReportSaver.Save(pores, ReportSaver.FileNamer(n));
+            ReportSaver.Save(pores, ReportSaver.AddOther(n));
         }
 
         public void SaveBatch() 
@@ -110,6 +111,8 @@ namespace Pores
                     Save(list, i);
                     if (GenerateBatchForEachModelFlag)
                         SaveBatch(list, i);
+                    if (GenerateConnectedPoresReportFlag)
+                        ConnectedPoreReportGenerator.CreateReport(list, i);
                 }
                 EnableControlsFlag = true;
             });

Pores/Models/Localizations/NormalLocalization.cs

@@ -27,6 +27,7 @@ namespace Pores.Models.Localizations
         public override ObservableCollection<Pore> GetLocalization()
         {
             var r = new Random();
+            var id = 0;
             GetMaxRadius();
             var result = new ObservableCollection<Pore>();
             for (int i = 0; i <= Material.NumberOfPores; i++)
@@ -42,7 +43,10 @@ namespace Pores.Models.Localizations
                         var randomDouble = r.NextDouble();
                         var gaussResult = GaussFunctionByHeight(c);
                         if (randomDouble < gaussResult)
-                            result.Add(new Pore() { Point = c, Radius = maxR });
+                        {
+                            result.Add(new Pore() { Point = c, Radius = maxR, Id = id });
+                            id++;
+                        }
                     }
             return result;
         }

Pores/Models/Pore.cs

@@ -7,5 +7,6 @@ namespace Pores.Models
     {
         public Point3D Point { get; set; }
         public double Radius { get; set; }
+        public int Id { get; set; }
     }
 }

Pores/Pores.csproj

@@ -82,6 +82,7 @@
     <Compile Include="Bootstrap.cs" />
     <Compile Include="Controllers\BaseSaveLoadController.cs" />
     <Compile Include="Controllers\BatchGenerator.cs" />
+    <Compile Include="Controllers\ConnectedPoreReportGenerator.cs" />
     <Compile Include="Controllers\ReportGenerator.cs" />
     <Compile Include="Controllers\PoreGenerator.cs" />
     <Compile Include="Helpers\PropertyChanged.cs" />